Oncotarget. 2017 Jul 31. Identification of novel genetic regulations associated with airway epithelial homeostasis using next-generation sequencing data and bioinformatics approaches. Chau-Chyun Sheu, Ming-Ju Tsai, Feng-Wei Chen, Kuo-Feng Chang, Wei-An Chang, Inn-Wen Chong, Po-Lin Kuo and Ya-Ling Hsu.
Clin Genet. 2017 Feb 7. doi: 10.1111/cge.12992. DEPDC5 mutations in familial and sporadic focal epilepsy. Tsai MH, Chan CK, Chang YC, Yu YT, Chuang ST, Fan WL, Li SC, Fu TY, Chang WN, Liou CW, Chuang YC, Ng CC, Hwang DY, Lim KS.
Cell Death Dis. 2017 Jan 12;8(1):e2555. doi: 10.1038/cddis.2016.479. Translational upregulation of Aurora-A by hnRNP Q1 contributes to cell proliferation and tumorigenesis in colorectal cancer. Lai CH, Huang YC, Lee JC, Tseng JT, Chang KC, Chen YJ, Ding NJ, Huang PH, Chang WC, Lin BW, Chen RY, Wang YC, Lai YC, Hung LY.
PLoS One. 2016 Sep 23;11(9):e0163663. Analysis of Genome-Wide Monoallelic Expression Patterns in Three Major Cell Types of Mouse Visual Cortex Using Laser Capture Microdissection. Lin CY, Huang SC, Tung CC, Chou CH, Gau SS, Huang HS
Ultrasound Obstet Gynecol. 2016 May 19. doi: 10.1002/uog.15965. Detection of 22q11.2 microduplication by cell-free DNA screening and chromosomal microarray in fetus with multiple anomalies. W.-J. Wu, G.-C. Ma, Y.-S. Lin, C.-H. Yeang, Y.-H. Ni, W.-C. Li, H.-D. Tsai, S. Shur-Fen Gau, M. Chen
BMC Genomics. 2016 Mar 9;17:212. Comparative transcriptome analysis of Gastrodia elata (Orchidaceae) in response to fungus symbiosis to identify gastrodin biosynthesis-related genes. Tsai CC, Wu KM, Chiang TY, Huang CY, Chou CH, Li SJ, Chiang YC.
2015
Genome Announc. 2015 Nov-Dec; 3(6): e01294-15. Genomic Sequence of Burkholderia multivorans NKI379, a Soil Bacterium That Inhibits the Growth of Burkholderia pseudomallei. Pei-Tan Hsueh, Jong-Kang Liu, Ya-Lei Chen, Pei-Ju Liu, Wen-Fan Ni, Yao-Shen Chen, Keh-Ming Wu, and Hsi-Hsun Lin.
Ultrasound Obstet Gynecol. 2014 Jul;44(1):25-30. doi: 10.1002/uog.13377. Genome-wide normalized score: a novel algorithm to detect fetal trisomy 21 during non-invasive prenatal testing. Yeang CH, Ma GC, Hsu HW, Lin YS, Chang SM, Cheng PJ, Chen CA, Ni YH, Chen M.
Biomed Res Int. 2014;2014:136130. doi: 10.1155/2014/136130. Epub 2014 Mar 18.Essential Functional Modules for Pathogenic and Defensive Mechanisms in Candida albicans Infections.Wang YC1, Tsai IC2, Lin C3, Hsieh WP4, Lan CY5, Chuang YJ6, Chen BS2.
Cancer Inform. 2014 Jan 21;13:21-45. doi: 10.4137/CIN.S12493. eCollection 2014.Prognostic features of signal transducer and activator of transcription 3 in an ER(+) breast cancer model system.Liu LY1, Chang LY2, Kuo WH3, Hwa HL2, Lin YS4, Jeng MH5, Roth DA6, Chang KJ7, Hsieh FJ8.
Cancer Lett. 2014 Mar 28;344(2):188-94. doi: 10.1016/j.canlet.2013.10.023. Epub 2013 Oct 30.Differential miRNA expression in repeated recurrence of nasopharyngeal carcinoma.Wang LJ1, Chou YF2, Chen PR2, Su B3, Hsu YC4, Chang CH5, Lee JW6.
Comput Math Methods Med. 2014;2014:813067. doi: 10.1155/2014/813067. Epub 2014 Feb 3.A supervised network analysis on gene expression profiles of breast tumors predicts a 41-gene prognostic signature of the transcription factor MYB across molecular subtypes.Liu LY1, Chang LY2, Kuo WH3, Hwa HL2, Chang KJ4, Hsieh FJ5.
Environmental and Experimental Botany Volume 101, May 2014, Pages 47–55Expression of a dye-decolorizing peroxidase results in hypersensitive response to cadmium stress through reducing the ROS signal in ArabidopsisChien-Pei Kung, Yi-Ru Wu, Huey-wen Chuang
Mod Pathol. 2014 Jan 3. doi: 10.1038/modpathol.2013.229. [Epub ahead of print]Inhibition of ZEB1 by miR-200 characterizes Helicobacter pylori-positive gastric diffuse large B-cell lymphomawith a less aggressive behavior.Huang WT1, Kuo SH2, Cheng AL2, Lin CW1.
PLoS One. 2014 Feb 21;9(2):e88795. doi: 10.1371/journal.pone.0088795. eCollection 2014.Aryl hydrocarbon receptor downregulates MYCN expression and promotes cell differentiation of neuroblastoma.Wu PY1, Liao YF2, Juan HF1, Huang HC3, Wang BJ4, Lu YL5, Yu IS6, Shih YY4, Jeng YM7, Hsu WM8, Lee H1.
2013
Acta Trop. 2013 Sep;127(3):251-60. doi: 10.1016/j.actatropica.2013.05.012. Epub 2013 May 31.A study of immunomodulatory genes responses to macrophages of Schistosoma japonicum infection duringdifferent stages by microarray analysis.Cheng PC1, Lin CN, Peng SY, Li LL, Luo TY, Fan CK, Lee KM.
Arthritis Res Ther. 2013;15(6):R190.Genome-wide expression profiles of subchondral bone in osteoarthritis.Chou CH, Wu CC, Song IW, Chuang HP, Lu LS, Chang JH, Kuo SY, Lee CH, Wu JY, Chen YT, Kraus VB, Lee MT.
Breast Cancer Res. 2013 Nov 12;15(6):R108. [Epub ahead of print]Lapatinib--induced NF-kappaB activation sensitizes triple-negative breast cancer cells to proteasome inhibitors.Chen YJ, Yeh MH, Yu MC, Wei YL, Chen WS, Chen JY, Shih CY, Tu CY, Chen CH, Hsia TC, Chien PH, Liu SH, Yu YL, Huang WC.
Eukaryot Cell. 2013 Jun;12(6):804-15. doi: 10.1128/EC.00014-13. Epub 2013 Mar 29.Diverse Hap43-independent functions of the Candida albicans CCAAT-binding complex.Hsu PC1, Chao CC, Yang CY, Ye YL, Liu FC, Chuang YJ, Lan CY.
Gene. 2013 Apr 10;518(1):91-100. doi: 10.1016/j.gene.2012.11.069. Epub 2012 Dec 20.Transcriptomic analysis of floral organs from Phalaenopsis orchid by using oligonucleotide microarray.Hsiao YY1, Huang TH, Fu CH, Huang SC, Chen YJ, Huang YM, Chen WH, Tsai WC, Chen HH.
Gynecol Oncol. 2013 Oct;131(1):182-90. doi: 10.1016/j.ygyno.2013.07.106. Epub 2013 Aug 1.IMP1 promotes choriocarcinoma cell migration and invasion through the novel effectors RSK2 and PPME1.Hsieh YT1, Chou MM, Chen HC, Tseng JJ.
Int Arch Allergy Immunol. 2013;161(1):74-80. doi: 10.1159/000343280. Epub 2012 Dec 15.The methylation patterns of a disintegrin and metalloproteinase 33 gene (ADAM33) in adult asthma.Yang PJ1, Li RN, Huang CC, Wang TH, Ko YC, Huang MS, Wang TN.
Int J Mol Sci. 2013 Oct 14;14(10):20492-507. doi: 10.3390/ijms141020492.Significant overexpression of DVL1 in Taiwanese colorectal cancer patients with liver metastasis.Huang MY1, Yen LC, Liu HC, Liu PP, Chung FY, Wang TN, Wang JY, Lin SR.
Int J Mol Sci. 2013 Oct 14;14(10):20492-507. doi: 10.3390/ijms141020492.Significant overexpression of DVL1 in Taiwanese colorectal cancer patients with liver metastasis.Huang MY1, Yen LC, Liu HC, Liu PP, Chung FY, Wang TN, Wang JY, Lin SR.
J Formos Med Assoc. 2013 Nov;112(11):713-20. doi: 10.1016/j.jfma.2012.08.006. Epub 2012 Sep 4.Microarray analysis of gene expression of bone marrow stem cells cocultured with salivary acinar cells.Lin CY1, Yang JR, Teng SL, Tsai S, Chen MH.
J Innate Immun. 2013;5(2):137-52. doi: 10.1159/000347104. Epub 2013 Feb 13.Identification of infection- and defense-related genes via a dynamic host-pathogen interaction network using a Candida albicans-zebrafish infection model.Kuo ZY1, Chuang YJ, Chao CC, Liu FC, Lan CY, Chen BS.
J Proteome Res. 2013 Dec 6;12(12):5878-90. doi: 10.1021/pr4008877. Epub 2013 Nov 20.Quantitative proteomics of protein complexes and their implications for cell reprograming and pluripotency.Sudhir PR1, Kumari MP, Hsu WT, Massiot J, Chen CH, Kuo HC, Chen CH.
Kaohsiung J Med Sci. 2013 Jun;29(6):312-8. doi: 10.1016/j.kjms.2012.08.012. Epub 2012 Oct 13.Hepatocellular carcinoma cells cause different responses in expressions of cancer-promoting genes in different cancer-associated fibroblasts.Lin ZY1, Chuang WL.
Life Sci. 2013 Sep 3;93(8):323-8. doi: 10.1016/j.lfs.2013.07.002. Epub 2013 Jul 16.Anti-cancer mechanisms of clinically acceptable colchicine con centrations on hepatocellular carcinoma.Lin ZY1, Wu CC, Chuang YH, Chuang WL.
Mol Cancer Ther. 2013 Jun;12(6):1016-25. doi: 10.1158/1535-7163.MCT-12-0832. Epub 2013 Mar 6.Downregulation of hepatoma-derived growth factor contributes to retarded lung metastasis via inhibition of epithelial-mesenchymal transition by systemic POMC gene delivery in melanoma.Tsai HE1, Liu GS, Kung ML, Liu LF, Wu JC, Tang CH, Huang CH, Chen SC, Lam HC, Wu CS, Tai MH.
Plant Cell Physiol. 2013 Feb;54(2):e11. doi: 10.1093/pcp/pct004. Epub 2013 Jan 16.Orchidstra: an integrated orchid functional genomics database.Su CL1, Chao YT, Yen SH, Chen CY, Chen WC, Chang YC, Shih MC.
Plant Physiol Biochem. 2013 May;66:98-104. doi: 10.1016/j.plaphy.2013.02.007. Epub 2013 Feb 21.Transcriptome analysis of phytohormone, transporters and signaling pathways in response to vanadium stress in rice roots.Lin CY1, Trinh NN, Lin CW, Huang HJ.
Plant Physiol. 2013 Jul;162(3):1566-82. doi: 10.1104/pp.113.221911. Epub 2013 May 29.The Arabidopsis ETHYLENE RESPONSE FACTOR1 regulates abiotic stress-responsive gene expression by binding to different cis-acting elements in response to different stress signals.Cheng MC1, Liao PM, Kuo WW, Lin TP.
PLoS Negl Trop Dis. 2013 May 16;7(5):e2218. doi: 10.1371/journal.pntd.0002218. Print 2013.DNA topoisomerase II is involved in regulation of cyst wall protein genes and differentiation in Giardia lamblia.Lin BC1, Su LH, Weng SC, Pan YJ, Chan NL, Li TK, Wang HC, Sun CH.
PLoS One. 2013 Jul 29;8(7):e70324. doi: 10.1371/journal.pone.0070324. Print 2013.Overexpression of CTHRC1 in hepatocellular carcinoma promotes tumor invasion and predicts poor prognosis.Chen YL1, Wang TH, Hsu HC, Yuan RH, Jeng YM.
PLoS One. 2013 Jun 21;8(6):e66613. Print 2013.Treatment of Glucocorticoids Inhibited Early Immune Responses and Impaired Cardiac Repair in Adult Zebrafish.Huang WC1, Yang CC, Chen IH, Liu YM, Chang SJ, Chuang YJ.
PLoS One. 2013 Nov 12;8(11):e80462. doi: 10.1371/journal.pone.0080462. eCollection 2013.A modified ABCDE model of flowering in orchids based on gene expression profiling studies of the moth orchid Phalaenopsis aphrodite.Su CL1, Chen WC, Lee AY, Chen CY, Chang YC, Chao YT, Shih MC.
PLoS One. 2013 Nov 6;8(11):e79961. doi: 10.1371/journal.pone.0079961. eCollection 2013.Activation of IFN-γ/STAT/IRF-1 in hepatic responses to Klebsiella pneumoniae infection.Lin YC1, Lu MC, Lin C, Chiang MK, Jan MS, Tang HL, Liu HC, Lin WL, Huang CY, Chen CM, Lai YC.
PLoS One. 2013 Oct 3;8(10):e76421. doi: 10.1371/journal.pone.0076421. eCollection 2013.Concurrent gene signatures for han chinese breast cancers.Huang CC1, Tu SH, Lien HH, Jeng JY, Huang CS, Huang CJ, Lai LC, Chuang EY.
PLoS One. 2013 Sep 3;8(9):e72483. doi: 10.1371/journal.pone.0072483. eCollection 2013.Dynamic transcript profiling of Candida albicans infection in zebrafish: a pathogen-host interaction study.Chen YY1, Chao CC, Liu FC, Hsu PC, Chen HF, Peng SC, Chuang YJ, Lan CY, Hsieh WP, Wong DS.
PLoS One. 2013;8(3):e58851. doi: 10.1371/journal.pone.0058851. Epub 2013 Mar 14.Identifying gene set association enrichment using the coefficient of intrinsic dependence.Tsai CA1, Liu LY.
Theriogenology. 2013 Jan 15;79(2):374-82.e1-7. doi: 10.1016/j.theriogenology.2012.10.010. Epub 2012 Nov 13.Differential gene expressions in testes of L2 strain Taiwan country chicken in response to acute heat stress.Wang SH1, Cheng CY, Tang PC, Chen CF, Chen HH, Lee YP, Huang SY.
2012
Arterioscler Thromb Vasc Biol. 2012 Aug;32(8):1875-83. doi: 10.1161/ATVBAHA.112.245852. Epub 2012 Jun 7.Surface markers of heterogeneous peripheral blood-derived smooth muscle progenitor cells.Wang CH1, Lee YS, Lin SJ, Mei HF, Lin SY, Liu MH, Chen JR, Cherng WJ.
Biomed Pharmacother. 2012 Sep;66(6):454-8. doi: 10.1016/j.biopha.2012.04.001. Epub 2012 May 9.Genes responsible for the characteristics of primary cultured invasive phenotype hepatocellular carcinoma cells.Lin ZY1, Chuang WL.
Biomed Pharmacother. 2012 Oct;66(7):525-9. doi: 10.1016/j.biopha.2012.02.001. Epub 2012 Mar 27.Cancer-associated fibroblasts up-regulate CCL2, CCL26, IL6 and LOXL2 genes related to promotion of cancer progression in hepatocellular carcinoma cells.Lin ZY1, Chuang YH, Chuang WL.
Cancer Inform. 2012;11:113-37. doi: 10.4137/CIN.S8470. Epub 2012 Apr 19.In Silico Prediction for Regulation of Transcription Factors on Their Shared Target Genes Indicates Relevant Clinical Implications in a Breast Cancer Population.Liu LY1, Chang LY, Kuo WH, Hwa HL, Shyu MK, Chang KJ, Hsieh FJ.
Cancer Inform. 2012;11:87-111. doi: 10.4137/CIN.S8633. Epub 2012 Apr 19.Major Functional Transcriptome of an Inferred Center Regulator of an ER(-) Breast Cancer Model System.Liu LY1, Chang LY, Kuo WH, Hwa HL, Lin YS, Huang SF, Chen CN, Chang KJ, Hsieh FJ.
Carcinogenesis. 2012 Jun;33(6):1142-8. doi: 10.1093/carcin/bgs131. Epub 2012 Mar 20.Hepatocyte growth factor activates Wnt pathway by transcriptional activation of LEF1 to facilitate tumor invasion.Huang FI1, Chen YL, Chang CN, Yuan RH, Jeng YM.
Dev Comp Immunol. 2012 Jan;36(1):166-73. doi: 10.1016/j.dci.2011.06.013. Epub 2011 Jul 3.Insights into the antibacterial and immunomodulatory functions of tilapia hepcidin (TH)2-3 against Vibrio vulnificus infection in mice.Pan CY1, Lee SC, Rajanbabu V, Lin CH, Chen JY.
EMBO J. 2012 Apr 4;31(7):1739-51. doi: 10.1038/emboj.2012.24. Epub 2012 Feb 14.Epigenetic silencing of myogenic gene program by Myb-binding protein 1a suppresses myogenesis.Yang CC1, Liu H, Chen SL, Wang TH, Hsieh CL, Huang Y, Chen SJ, Chen HC, Yung BY, Chin-Ming Tan B.
Eukaryot Cell. 2012 Feb;11(2):168-82. doi: 10.1128/EC.05200-11. Epub 2011 Dec 22.Rhb1 regulates the expression of secreted aspartic protease 2 through the TOR signaling pathway in Candida albicans.Chen YT1, Lin CY, Tsai PW, Yang CY, Hsieh WP, Lan CY.
J Biol Chem. 2012 Jan 20;287(4):2798-809. doi: 10.1074/jbc.M111.258947. Epub 2011 Nov 30.TCF12 protein functions as transcriptional repressor of E-cadherin, and its overexpression is correlated with metastasis of colorectal cancer.Lee CC1, Chen WS, Chen CC, Chen LL, Lin YS, Fan CS, Huang TS.
Mol Cell Proteomics. 2012 Oct;11(10):901-15. Epub 2012 Jul 3.Label-free quantitative proteomics and N-glycoproteomics analysis of KRAS-activated human bronchial epithelial cells.Sudhir PR1, Chen CH, Pavana Kumari M, Wang MJ, Tsou CC, Sung TY, Chen JY, Chen CH.
PLoS One. 2012;7(9):e44024. doi: 10.1371/journal.pone.0044024. Epub 2012 Sep 7.n-Butylidenephthalide (BP) maintains stem cell pluripotency by activating Jak2/Stat3 pathway and increases the efficiency of iPS cells generation.Liu SP1, Harn HJ, Chien YJ, Chang CH, Hsu CY, Fu RH, Huang YC, Chen SY, Shyu WC, Lin SZ.
PLoS One. 2012;7(3):e34388. doi: 10.1371/journal.pone.0034388. Epub 2012 Mar 27.Involvement of iron in biofilm formation by Staphylococcus aureus.Lin MH1, Shu JC, Huang HY, Cheng YC.
PLoS One. 2012;7(4):e34901. doi: 10.1371/journal.pone.0034901. Epub 2012 Apr 18.Genome-wide gene expression analysis implicates the immune response and lymphangiogenesis in the pathogenesis of fetal chylothorax.Yeang CH1, Ma GC, Shih JC, Yang YS, Chen CP, Chang SP, Wu SH, Liu CS, Kuo SJ, Chou HC, Hwu WL, Cameron AD, Ginsberg NA, Lin YS, Chen M.
PLoS One. 2012;7(9):e45831. doi: 10.1371/journal.pone.0045831. Epub 2012 Sep 25.Molecular characteristics and metastasis predictor genes of triple-negative breast cancer: a clinical study of triple-negative breast carcinomas.Kuo WH1, Chang YY, Lai LC, Tsai MH, Hsiao CK, Chang KJ, Chuang EY.
ScientificWorldJournal. 2012;2012:280264. doi: 10.1100/2012/280264. Epub 2012 Mar 1.A constitutively mannose-sensitive agglutinating Salmonella enterica subsp. enterica serovar typhimurium strain, carrying a transposon in the fimbrial usher gene stbC, exhibits multidrug resistance and flagellated phenotypes.Wu KH1, Wang KC, Lee LW, Huang YN, Yeh KS.
Toxicol Appl Pharmacol. 2012 Jul 15;262(2):107-16. doi: 10.1016/j.taap.2012.04.023. Epub 2012 Apr 25.Early induction of cytokines/cytokine receptors and Cox2, and activation of NF-κB in 4-nitroquinoline 1-oxide-induced murine oral cancer model.Liu YC1, Ho HC, Lee MR, Lai KC, Yeh CM, Lin YM, Ho TY, Hsiang CY, Chung JG.
Cancer Prev Res. 2012 Apr;5(4):665-74. Oncogenic Function and Early Detection Potential of miRNA-10b in Oral Cancer as Identified by microRNA Profiling.
PLoS One. 2012 Genome-wide gene expression analysis implicates the immune response and lymphangiogenesis in the pathogenesis of fetal chylothorax.
J Biol Chem. 2012 Jan 20;287(4):2798-809 TCF12 Protein Functions as Transcriptional Repressor of E-cadherin, and Its Overexpression Is Correlated with Metastasis of Colorectal Cancer.
2011
Arch Virol. 2011 Nov;156(11):1917-29. doi: 10.1007/s00705-011-1063-3. Epub 2011 Jul 22.Avian reovirus S1133-induced DNA damage signaling and subsequent apoptosis in cultured cells and in chickens.Lin PY1, Liu HJ, Chang CD, Chang CI, Hsu JL, Liao MH, Lee JW, Shih WL.
Biomaterials. 2011 Oct;32(28):6804-14. doi: 10.1016/j.biomaterials.2011.05.053. Epub 2011 Jul 2.Modulation of the immune-related gene responses to protect mice against Japanese encephalitis virus using the antimicrobial peptide, tilapia hepcidin 1-5.Huang HN1, Rajanbabu V, Pan CY, Chan YL, Hui CF, Chen JY, Wu CJ.
BMC Med Genomics. 2011 Sep 19;4:65. doi: 10.1186/1755-8794-4-65.MicroRNA-34a modulates genes involved in cellular motility and oxidative phosphorylation in neural precursors derived from human umbilical cord mesenchymal stem cells.Chang SJ1, Weng SL, Hsieh JY, Wang TY, Chang MD, Wang HW.
Cell Transplant. 2011;20(10):1529-45. doi: 10.3727/096368910X564067. Epub 2011 Mar 7.Efficient derivation and concise gene expression profiling of human embryonic stem cell-derived mesenchymal progenitors (EMPs).Yen ML1, Hou CH, Peng KY, Tseng PC, Jiang SS, Shun CT, Chen YC, Kuo ML.
Endocrinology. 2011 Feb;152(2):384-93. doi: 10.1210/en.2010-0493. Epub 2010 Dec 8.Insulin up-regulates heme oxygenase-1 expression in 3T3-L1 adipocytes via PI3-kinase- and PKC-dependent pathways and heme oxygenase-1-associated microRNA downregulation.Chang CL1, Au LC, Huang SW, Fai Kwok C, Ho LT, Juan CC.
J Hepatol. 2011 Apr;54(4):685-94. doi: 10.1016/j.jhep.2010.07.035. Epub 2010 Sep 22.Synergism between p53 and Mcl-1 in protecting from hepatic injury, fibrosis and cancer.Weng SY1, Yang CY, Li CC, Sun TP, Tung SY, Yen JJ, Tsai TF, Chen CM, Chen SH, Hsiao M, Huang PH, Yang-Yen HF.
Nucleic Acids Res. 2011 Nov 1;39(20):e139. doi: 10.1093/nar/gkr645. Epub 2011 Aug 25.Transgenic zebrafish model to study translational control mediated by upstream open reading frame of human chop gene.Lee HC1, Chen YJ, Liu YW, Lin KY, Chen SW, Lin CY, Lu YC, Hsu PC, Lee SC, Tsai HJ.
PLoS One. 2011;6(12):e28329. doi: 10.1371/journal.pone.0028329. Epub 2011 Dec 8.Revealing the functions of the transketolase enzyme isoforms in Rhodopseudomonas palustris using a systems biology approach.Hu CW1, Chang YL, Chen SJ, Kuo-Huang LL, Liao JC, Huang HC, Juan HF.
PLoS One. 2011;6(7):e22248. doi: 10.1371/journal.pone.0022248. Epub 2011 Jul 14.Impact of Hfq on global gene expression and virulence in Klebsiella pneumoniae.Chiang MK1, Lu MC, Liu LC, Lin CT, Lai YC.
Taiwan J Obstet Gynecol. 2011 Jun;50(2):165-71. doi: 10.1016/j.tjog.2011.01.022.Low-dose LBH589 increases the sensitivity of cisplatin to cisplatin-resistant ovarian cancer cells.Ma YY1, Lin H, Moh JS, Chen KD, Wang IW, Ou YC, You YS, Lung CC.
BMC Medical Genomics 2011, 4:65 MicroRNA-34a modulates genes involved in cellular motility and oxidative phosphorylation in neural precursors derived from human umbilical cord mesenchymal stem cells.
PLoS One. 2011;6(7):e22248. Impact of Hfq on global gene expression and virulence in Klebsiella pneumoniae.
Endocrinology, 2011 ;152(2) Insulin Up-Regulates Heme Oxygenase-1 Expression in 3T3-L1 Adipocytes via PI3-Kinase- and PKC-Dependent Pathways and Heme Oxygenase-1–Associated MicroRNA Downregulation.
2010
Biochem Biophys Res Commun. 2010 Nov 12;402(2):414-20. doi: 10.1016/j.bbrc.2010.10.047. Epub 2010 Oct 14.A harpin-induced ethylene-responsive factor regulates plant growth and responses to biotic and abiotic stresses.Chuang HW1, Harnrak A, Chen YC, Hsu CM.
BMC Musculoskelet Disord. 2010 Aug 12;11:181. doi: 10.1186/1471-2474-11-181.Entrapment neuropathy results in different microRNA expression patterns from denervation injury in rats.Rau CS1, Jeng JC, Jeng SF, Lu TH, Chen YC, Liliang PC, Wu CJ, Lin CJ, Hsieh CH.
J Biol Chem. 2010 Oct 15;285(42):32213-26. doi: 10.1074/jbc.M110.156620. Epub 2010 Aug 10.A novel pax-like protein involved in transcriptional activation of cyst wal l protein genes in Giardia lamblia.Wang YT1, Pan YJ, Cho CC, Lin BC, Su LH, Huang YC, Sun CH.
J Biomed Sci. 2010 Jan 11;17:2. doi: 10.1186/1423-0127-17-2.Genetic copy number variants in sib pairs both affected with schizophrenia.Lee CH1, Liu CM, Wen CC, Chang SM, Hwu HG.
Peptides. 2010 Jul;31(7):1262-72. Epub 2010 Apr 10. Antimicrobial peptide of an anti-lipopolysaccharide factor modulates of the inflammatory response in RAW264.7 cells
Exp Cell Res. 2010 Apr 15;316(7):1119-26. Identification of the potential target genes of microRNA-146a induced by PMA treatment in human microvascular endothelial cells.
Vet Microbiol. 2010 Jan 25 A time-course study of gene responses of chicken granulosa cells to Salmonella Enteritidis infection.
2009
J Neurotrauma. 2009 Dec;26(12):2345-53.Profiling muscle-specific microRNA expression after peripheral denervation and reinnervation in a rat model.
BMC Med Genomics. 2009 Aug 8;2:51 Hepatic inflammation mediated by hepatitis C virus core protein is ameliorated by blocking complement activation.
J Control Release. 2009 Nov 3;139(3):197-204. Epub 2009 Jul 18. Interactions between octaarginine and U-937 human macrophages: global gene expression profiling, superoxide anion content, and cytokine production.
BMC Bioinformatics 2009 ;17(10):85 Statistical identification of gene association by CID in application of constructing ER regulatory network.
Nucleic Acids Research, 2009 ;37(10):e77 Labeled microRNA pull-down assay system: an experimental approach for high-throughput identification of microRNA-target mRNAs.
2008
BMC Genomics. 2008 Feb 29;9:109. doi: 10.1186/1471-2164-9-109.Altered expression patterns of lipid metabolism genes in an animal model of HCV core-related, nonobese, modest hepatic steatosis.Chang ML1, Yeh CT, Chen JC, Huang CC, Lin SM, Sheen IS, Tai DI, Chu CM, Lin WP, Chang MY, Liang CK, Chiu CT, Lin DY.
Breast Cancer: Basic and Clinical Research. 2008. Comparison and Identification of Estrogen-Receptor Related Gene Expression Profiles in Breast Cancer of Different Ethnic Origins.
BMC Genomics. 2008 ;29(9):109 Altered expression patterns of lipid metabolism genes in an animal model of HCV core-related, nonobese, modest hepatic steatosis.
J Hum Genet. 2008;53:136–43 Gene dosage change of TPTE and BAGE2 and breakpoint analysis in Robertsonian Down syndrome.
2007
Oncogene. 2007 ;26(57):7859-71. Molecular Signatures of Metaplastic Carcinoma of Breast by Large-Scale Transcriptional Profiling: Identification of Genes Potentially Related to Epithelial-Mesenchymal Transition.
2006
Oncol Rep. 2006 ;15(4):919-26. A homologue of the Drosophila headcase protein is a novel tumor marker for early-stage colorectal cancer.
Fertility and Sterility 2006 ;86(6):1650-58, Identification of ten novel genes involved in human spermatogenesis by microarray analysis of testicular tissue.
Ann Surg Oncol. 2006 ;13(11):1474-84. A gene expression profile for vascular invasion can predict the recurrence after resection of hepatocellular carcinoma: a microarray approach.
Hepatogastroenterology. 2006 ;53(70):484-90. Distinct gene expression profiles in gastric epithelial cells induced by different clinical isolates of Helicobacter pylori-implication of bacteria and host interaction in gastric carcinogenesis.